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Centraalbureau voor Schimmelcultures, Fungal Biodiversity Centre, Uppsalalaan 8, 3584 CT Utrecht, and Laboratory of Phytopathology, Wageningen University, Binnenhaven 5, 6709 PD Wageningen, the Netherlands
Johannes Z. Groenewald
Centraalbureau voor Schimmelcultures, Fungal Biodiversity Centre, Uppsalalaan 8, 3584 CT Utrecht, the Netherlands
Uwe Braun
Martin-Luther-Universität, FB. Biologie, Institut für Geobotanik und Botanischer Garten, Neuwerk 21, D-06099 Halle (Saale), Germany
Pedro W. Crous
Centraalbureau voor Schimmelcultures, Fungal Biodiversity Centre, Uppsalalaan 8, 3584 CT Utrecht, and Laboratory of Phytopathology, Wageningen University, Binnenhaven 5, 6709 PD Wageningen, the Netherlands
| ABSTRACT |
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The genus Cercospora is one of the largest and most heterogeneous genera of hyphomycetes. Cercospora species are distributed worldwide and cause Cercospora leaf spot on most of the major plant families. Numerous species described from diverse hosts and locations are morphologically indistinguishable from C. apii and subsequently are referred to as C. apii sensu lato. The importance and ecological role that different hosts play in taxon delimitation and recognition within this complex remains unclear. It has been shown that Cercospora leaf spot on celery and sugar beet are caused respectively by C. apii and C. beticola, both of which are part of the C. apii complex. During this study we characterized a new Cercospora species, C. apiicola, which was isolated from celery in Venezuela, Korea and Greece. The phylogenetic relationship between C. apiicola and other closely related Cercospora species was studied with five different gene areas. These analyses revealed that the C. apiicola isolates cluster together in a well defined clade. Both C. apii and C. beticola sensu stricto form well defined clades and are shown to have wider host ranges and to represent distinct species.
Key words: Ascomycetes, Cercospora apii complex, Cercospora leaf spot, molecular phylogeny, species boundaries, taxonomy
| INTRODUCTION |
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To date only a few species belonging to C. apii s.l. have been cultured, and molecular data addressing host specificity within this complex is still lacking (Crous et al 2004
). Three scenarios are possible when examining the host-species association of taxa belonging to the C. apii complex. The first scenario is that a single species of Cercospora occurs on a wide host range; the second is that several species exist with overlapping host ranges; the third is that some Cercospora species are host specific whereas others are not.
The first evidence that distinct species exist within the C. apii morphotype recently was published by Groenewald et al (2005)
. The latter study focused on Cercospora species isolated from sugar beet (Beta vulgaris) and celery (Apium graveolens). Characteristics examined for these isolates included morphology, cultural characteristics and cardinal temperature requirements for growth. These data were supplemented with amplified fragment length polymorphism analyses and phylogenetic analyses with five different genes. Groenewald et al (2005)
showed that three distinct Cercospora species exist on sugar beet and/or celery, namely C. beticola on sugar beet, C. apii on both celery and sugar beet and a third that was isolated from celery in Venezuela and Korea.
The ability to infect different hosts during artificial inoculation is of questionable value as a character in species delimitation. For instance, a recent study revealed that C. beticola could infect safflower during artificial inoculation experiments (Lartey et al 2005
). However C. beticola has yet to be isolated from this host in the field. Only a few taxa that belong to the C. apii complex have been studied in the past in an attempt to elucidate the relationship between fungal species and host. The first objective of this study, therefore, was to name the new Cercospora species from celery. The second objective was to use DNA sequence data to examine the host range of this species, including C. apii s.s. and C. beticola s.s. as defined by Groenewald et al (2005)
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| MATERIALS AND METHODS |
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gene (EF), the calmodulin gene (CAL) and the histone H3 gene (HIS). PCR primers and amplification conditions followed the protocols outlined by Groenewald et al (2005)Amplicons were sequenced in both directions with the PCR primers and a DYEnamic ET Terminator Cycle Sequencing Kit (Amersham Biosciences, Roosendal, the Netherlands) according to the manufacturers recommendations. The products were analyzed on an ABI Prism 3700 DNA Sequencer (Perkin-Elmer, Foster City, California). A consensus sequence was computed from the forward and reverse sequences with SeqMan from the Lasergene package (DNAstar, Madison, Wisconsin).
Data analysis.
The consensus sequences were assembled and added to alignment (TreeBASE matrix number M2242) of Groenewald et al (2005)
with Sequence Alignment Editor 2.0a11 (Rambaut 2002
), and manual adjustments for improvement were made by eye where necessary. The phylogenetic analyses of sequence data were done in PAUP (phylogenetic analysis using parsimony) 4.0b10 (Swofford 2003
) and consisted of neighbor joining analysis with the uncorrected "p", the Jukes-Cantor and the HKY85 substitution models. Alignment gaps were treated as missing data and all characters were unordered and of equal weight. Any ties were broken randomly when encountered. For parsimony analysis, alignment gaps were treated as a fifth character state and all characters were unordered and of equal weight. Maximum parsimony analysis was performed for all datasets with the heuristic search option with 100 random taxa additions and tree bisection and reconstruction (TBR) as the branch-swapping algorithm. Branches of zero length were collapsed and all multiple, equally parsimonious trees were saved. The robustness of the trees was evaluated by 1000 bootstrap replications (Hillis and Bull 1993
). Other measures calculated included tree length, consistency index, retention index and rescaled consistency index (TL, CI, RI and RC). The resulting trees were printed with TreeView 1.6.6 (p 1996). A partition homogeneity test was done in PAUP to test whether the different loci can be used in a combined analysis (Farris et al 1994
). Sequences were deposited in GenBank (accession numbers listed in TABLE I
) and the alignment and trees in TreeBASE (accession number SN2512).
Morphology.
Fungal structures were mounted in lactic acid and examined under a light microscope (1000x). The extremes of spore measurements (30 observations) are given in parentheses. Colony colors were rated after 8 d on MEA and OA at 24 C in the dark with the color charts of Rayner (1970)
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| RESULTS |
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Differt a C. apii (s.s. et s.l.) conidiophoris relative brevibus, 2570 x 46 µm, conidiis obclavatis-cylindraceis, nonacicularibus, tantum 16-septatis.
Specimen examined.. VENEZUELA. La Guanota, Caripe, Edo. Monagas, 1050 m.s.n.m., Apium sp., 23 Jul 2002, N. Pons, HOLOTYPE herb. CBS 18473, culture ex-type CBS 116457 MycoBank MB500768.
Leaf spots amphigenous, subcircular to irregular, 310 mm diam, medium brown, with a raised or inconspicuous, indefinite margin, not surrounded by a border of different color. Caespituli amphigenous, but primarily hypophyllous. Stromata lacking to well developed, 3060 µm diam, medium brown. Conidiophores arising in fascicles of 410, moderately dense, arising from stromata, emerging through stomata or erumpent through the cuticle, subcylindrical, upper part geniculate-sinuous, unbranched, 13-septate, 2570 x 46 µm, medium brown, becoming pale brown toward the apex, smooth, wall somewhat thickened. Conidiogenous cells integrated, terminal, 1530 x 45 µm, occasionally unilocal, usually multilocal, sympodial; loci subcircular, planate, thickened, darkened, refractive, 2.53 µm wide. Conidia solitary, cylindrical when small, obclavate-cylindrical when mature, not acicular, (50)80120 (150) x (3)45 µm, 16-septate; apex subobtuse, base obconically subtruncate; hila 22.5 µm wide, thickened, darkened, refractive.
Cultural characteristics.. Colonies are smooth to folded, erumpent with smooth, even to uneven margins and sparse to moderate aerial mycelium; white to smoke-gray on MEA (surface), and olivaceous-gray to iron-gray beneath; on OA colonies are white to olivaceous-gray on the surface. Cardinal temperature requirements for growth, min 6 C, opt 24 C, max 30 C.
Host range and distribution.. Apium graveolens, Apium sp., Greece, Korea, Venezuela.
| DISCUSSION |
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Chupp (1954)
associated Cercospora leaf spot on sugar beet with infections of C. beticola, and that of celery with C. apii. Ellis (1971)
discussed the C. apii s.l. isolates in detail and described a wide host range for this species, but five years later he changed his opinion and narrowed the host range of C. apii to celery and C. beticola to sugar beet (Ellis 1976
). Crous and Braun (2003)
linked 83 host genera to C. apii and nine host genera to C. beticola infections. Groenewald et al (2005)
again cast doubt on the purported wide host ranges of these species. In the present study a survey of Cercospora isolates from 10 host genera identified several additional hosts for both C. apii s.s. and C. beticola s.s. From these data we can confirm four additional host genera for C. apii (Helianthemum, Moluccella, Plantago, Plumbago) and five additional host genera for C. beticola (Apium, Chrysanthemum, Limonium, Malva, Spinacia). According to Crous and Braun (2003)
several Cercospora species (listed in parentheses) are associated with these hosts: Apium (C. apii), Beta (C. beticola), Helianthemum (C. cistinearum, C. helianthemi), Moluccella (C. molucellae), Plantago (C. pantoleuca, C. plantaginis), Plumbago (C. apii, C. plumbaginea), Limonium (C. apii, C. insulana, C. statices), Malva (C. althaeina, C. beticola, C. hyalospora, C. malvae, C. malvarum) and Spinacia (C. bertrandii, C. beticola, C. spinaciicola). In the treatment of Crous and Braun (2003)
neither Apium, Chrysanthemum or Limonium are listed as hosts of C. beticola nor Beta, Helianthemum, Moluccella and Plantago as hosts of C. apii. This study provides the first molecular evidence that these two species have wider host ranges than had been accepted by Chupp (1954)
and Ellis (1976)
. However from the present study it appears that both species have narrower host ranges than that proposed by Crous and Braun (2003)
, but this has to be investigated further by conducting pathogenicity studies on all the hosts previously listed for these species.
The host range data obtained in the present study illustrate that C. beticola s.s. and C. apii s.s. are not entirely host specific and that it is not possible to identify these two species solely based on host. Despite of the additional host genera that were found for C. apii and C. beticola, it is clear that C. apii s.s. is mainly isolated from celery, whereas C. beticola is mainly isolated from sugar beet, even though both of these species have been isolated from the others primary host in the past.
Crous and Groenewald (2005)
introduced the pogo stick hypothesis to explain the colonization of necrotic Mycosphaerella lesions by other species of Mycosphaerella that jump hosts in the process of reaching their real hosts. The possibility that this process of substrate colonization and host jumps also occurs in asexual Mycosphaerella species could explain the isolation of specific Cercospora species from "atypical" hosts and needs to be investigated further. It would be especially interesting to determine whether Cercospora species occurring on "atypical" hosts are able to cause disease on these hosts or not.
As illustrated in this study, morphology, host specificity and geographic location are not suitable characters for the identification of species of the Cercospora apii complex. Groenewald et al (2005)
used sequence data in combination with other features such as growth rate to establish species boundaries for C. apii, C. apiicola (as Cercospora sp.) and C. beticola. From these established species boundaries, species-specific primers were designed in polymorphic areas of the calmodulin gene for the three species. This combined approach probably represents the most reliable way to characterize and identify species within this complex.
Five loci were used in this study for phylogenetic analyses, although all five loci sequenced were not congruent and therefore could not be used in a combined phylogenetic analysis. Two separate analyses thus were performed, the first combining ITS, EF, ACT and CAL sequences and the second using only HIS sequences. The first analysis separated the C. apii s.s., C. beticola s.s. and C. apiicola isolates. Although the second analysis also was able to separate the C. apiicola isolates from the C. apii s.s./C. beticola s.s. isolates, it was unable to distinguish between C. apii s.s. and C. beticola s.s. isolates. Using HIS data a small cluster representing seven C. beticola s.s. and one C. apii s.s. isolate grouped separately from other C. apii s.s./C. beticola s.s. isolates. The unique polymorphisms (10 in total) observed in the histone H3 sequences of these isolates were identical and were not present in the other isolates or in our Cercospora sequence database. A possible explanation might be host jumping by the Helianthemum isolate, followed by recombination with the Beta isolates. However more Helianthemum isolates need to be studied to confirm whether this allele is unique to Helianthemum before one can address this issue. Caution therefore should be taken when using histone H3 sequence data for Cercospora phylogeny because variation in the histone H3 sequence may not indicate species differences.
It can be concluded from this study that strains belonging to the C. apii s.s. and C. beticola s.s. clades can be isolated from other hosts and, although these species are mainly isolated from celery and sugar beet, they are not host specific. It seems that the new species from celery described in this paper (viz. C. apiicola) is host specific because no other Cercospora strain isolated from other hosts and available in our sequence database has similar sequences. The reasons why host jumping by C. apii and C. beticola is so common remains unknown. However it is not unlikely that under stressa shortage of host tissue or unsuitable weatherthe new species might be able to jump from celery onto other hosts.
| ACKNOWLEDGMENTS |
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| FOOTNOTES |
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1 Corresponding author. E-mail: m.groenewald{at}cbs.knaw.nl
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