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Skogforsk, Bioteknologi, Avd. 1, Høgskoleveien 12, 1432 Ås, Norway
Kari Korhonen
Finnish Forest Research Institute, P.O. Box 18 (Jokiniemenkuja 1), FIN-01301 Vantaa, Finland
Robin Sen
Division of General Microbiology, Department of Biosciences, P.O. Box 56 (Viikinkaari 9), FIN-00014 University of Helsinki, Finland
| ABSTRACT |
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Strains of Ceratobasidium bicorne (anamorph uninucleate Rhizoctonia), causing root dieback in nursery-grown conifer seedlings, were fruited in the laboratory and the pairing interactions among sibling, single-basidiospore progeny were investigated. No mating reactions were observed. Instead, a high frequency of somatic incompatibility was observed in progeny pairings, indicated by a killing reaction in hyphal anastomosis and by formation of a demarcation line. The F1 progeny also could be fruited, and the level of somatic incompatibility within the F2 progeny remained high, even if lower than in the F1 progeny. The interaction types in pairings within a family of progeny were similar in all respects to those between field isolates, indicating that the species is homothallic. The uninucleate condition of vegetative cells and the basidial characteristics would indicate homokaryotic fruiting, but the possibility of pseudohomothallism remains. We currently are not able to provide an explanation for the mechanism promoting somatic incompatibility in this species, but it seems likely that the classic heterogenic model of somatic incompatibility recognized in basidiomycetes is not applicable here. Alternative mechanisms are discussed.
Key words: basidiomycetes, homothallism
| INTRODUCTION |
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The common phytopathogen Rhizoctonia solani Kühn [teleomorph Thanatephorus cucumeris (Frank) Donk] is by far the most studied species in the genus. Field isolates of R. solani have multinucleate vegetative cells and are regarded as heterokaryotic. Isolates are subdivided into anastomosis groups (AGs) based on hyphal anastomosis behavior. With few exceptions, anastomosis takes place only between members within a single AG. Currently, R. solani is known to consist of 13 anastomosis groups (AGs) (Carling 1996
, Carling et al 1999
). Numerous studies using a variety of genetic and biochemical markers have shown that these AGs represent genetically isolated populations (e.g., Vilgalys and Cubeta 1994
, Kuninaga et al 1997
). Therefore, R. solani is regarded as a species complex.
The genetic basis of hyphal anastomosis in Rhizoctonia has not been studied, but a somatic incompatibility system has been offered as an explanation for the phenomenon (e.g., Anderson 1982
, Adams 1996
). Somatically compatible isolates produce a hyphal interaction termed perfect fusion (C3 reaction; Carling 1996
). This involves the fusion of cell walls and mixing of cytoplasm between the paired isolates, which results in the formation of living hyphal bridges between the colonies. Such a reaction is typical in self pairings. Excluding pairings between isolates originating from the same field or plant tissues, perfect fusion is a rare event in non-self pairings. Anastomosis between somatically incompatible isolates results in a killing reaction (C2; Carling 1996
), in which anastomosing and adjacent cells die after cell-wall fusion, thus preventing development of cytoplasmic connections. This is a typical interaction type in non-self pairings within an anastomosis group.
Somatic incompatibility maintains individuality of confronting mycelia and usually prevents genetic exchange between them. In basidiomycetes, it typically occurs between secondary (heterokaryotic) mycelia and is regarded as a heterogenic system primarily controlled by nuclear genes; a difference at any of the corresponding loci leads to an incompatibility reaction (Worrall 1997
). An approach that has been used in several studies is the construction of pedigreed heterokaryons, in which one nucleus is kept constant in all mycelia. Such an approach permits the analysis of variation due to one set of nuclei in secondary mycelia in the absence of confounding variation from the conjugate nucleus. Detailed information concerning the somatic incompatibility system is lacking for most basidiomycetes, but several multiallelic loci have been suggested in Heterobasidion annosum (Fr.) Bref. (Hansen et al 1993
), a single locus in Phellinus gilvus (Schwein) Fr. (Rizzo et al 1995
), two loci in Armillaria ostoyae (Romag.) Herink. (Guillaumin 1998
), and three to four in Collybia fusipes (Bull. : Fr.) Quel. (Marçais et al 2000
). The genetic basis of somatic incompatibility has been well established in some ascomycetes; it is a heterogenic mechanism involving many genes. Eleven genes, including those at the mating type locus, control somatic incompatibility in Neurospora crassa Shear & Dodge (Perkins 1988
), nine in Podospora anserina (Cesati) Niessl (Bégueret et al 1994
) and eight in Aspergillus nidulans (Eidam) G. Winter (Croft and Dales 1984
). In contrast to the somatic incompatibility reactions that occur between secondary mycelia in basidiomycetes, those in the ascomycetes take place between homokaryons, the system preventing formation of heterokaryons between different individuals. Fully compatible reactions occur only between isolates with the same allele at each locus.
In R. solani, typical diagnostic markers enabling separation of homokaryons from heterokaryons are absent; both possess multinucleate cells with no clamp connections. The genetics of several R. solani AGs has been studied primarily by analysis of heterokaryotic tuft formation, which arise at the contact zone between the paired homokaryons. Currently, the genetics of only two AGs (AG 1 and AG 4) are understood to some extent; data have been presented showing that field isolates of these AGs are heterokaryotic and possess a distinctive bipolar mating system with multiple alleles (Adams and Butler 1982
, Anderson 1982
, Adams 1996
, Julian et al 1996
). Very little is known about the mating system of the remaining AGs. Evidence has been presented that mating processes (indicated by formation of heterokaryotic mycelial tufts between paired homokaryons) occur independently of somatic incompatibility processes in AG 1-IC (Julian et al 1996
).
A uninucleate Rhizoctonia species causing root dieback of conifer seedlings has been identified from forest nurseries in Finland and Norway (e.g., Venn et al 1986
, Hietala 1995
). On the basis of basidial characteristics and sequence analysis of the ITS region of ribosomal DNA, it was identified as Ceratobasidium bicorne J. Erikss. & Ryvarden, a species originally described as a parasite on mosses (Hietala et al 1994
, 2001
). Before these findings, the genus Ceratobasidium was considered binucleate in the vegetative stage. Almost nothing is known about the genetics of binucleate Ceratobasidium spp., which are divided into at least 21 AGs (see e.g., Sneh et al 1991
). Based on anastomosis reactions, field isolates of the uninucleate Ceratobasidium form a single AG, typically presenting a somatic incompatibility reaction when paired against each other (Hietala et al 1994
, Hietala 1995
, Lilja et al 1992
). Isolates of this fungus can be fruited readily under laboratory conditions (Hietala et al 1994
, Hietala 1997
). Attempts to investigate the sexual system indicated that the fungus is homothallic but a high degree of somatic incompatibility unexpectedly was observed in pairings between single-spore isolates. Here we present results from pairings between single-basidiospore isolates of the F1 and F2 progeny of this fungus.
| MATERIALS AND METHODS |
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Interactions between field isolates and within F1 and F2 progeny
Field isolates were paired in all combinations on PDA and on 0.1% MEA as described above. Pairings were replicated (n = 3) on both media. Selected field isolates were fruited and single-spore isolations performed as described above. Randomly selected single-spore isolates from each progeny were paired with each other and the parent on PDA and on 0.1% MEA in all combinations. For control, hyphal-tip cell isolations (Korhonen and Hintikka 1980
) were made from 2-day-old mycelium of field isolates (250, 263, 264 and T8A) and paired in all combinations. As a further control, one single-cell isolate from 250 and 263 were fruited and the progeny were examined for somatic incompatibility reactions on PDA. To investigate the F2 progeny, randomly selected single-spore isolates from field isolates 263 and T8A were fruited and the progeny were screened for variation in pairings on PDA. In Isolate 263, the parent and selected F1 and F2 single-spore isolates also were paired on PDA.
The behavior of nuclei in vegetative hyphae growing in Petri dishes on 0.1% MEA was investigated with phase-contrast microscopy. Young colonies growing on MEA-coated slides also were stained with HCl-Giemsa (Wilson 1992
). To observe nuclear behavior in basidia, hymenial samples were taken from Isolate 263 and stained with HCl-Giemsa or DAPI, following the procedure described by Cooke et al (1987)
.
| RESULTS |
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Mycelial interactions in pairings between single-basidiospore isolates were similar to the pairings between field isolates. Somatic incompatibility, expressed by the formation of a demarcation line (Fig. 1) and the presence of a killing reaction, was frequent in pairings between progeny members. Its occurrence showed no distinct pattern. Within the F1 progeny of the field isolate 260, 81 and 83 non-self pairings out of 90 showed a demarcation line on PDA and a killing reaction on 0.1% MEA, respectively (Table III). The corresponding frequencies within the F1 progeny of isolate 264 were 77 and 84 out of 90 (Table IV); within the F1 progeny of isolate 250, they were 24 and 22 out of 28 (data not shown); within the F1 progeny of 83-111/1N, they were 23 and 18 out of 28 (Table V). In nine non-self pairings within the F1 progeny of 83-111/1N, both killing reaction and perfect fusion were observed in the same replicate. Within the F1 progeny of field isolates T8A and 263, the rate of incompatibility in non-self pairings on PDA was 29/36 and 31/45, respectively (data not shown). With one exception (isolates 260 vs 260/7; Table III), a demarcation line was produced in pairings between the parental isolate and its progeny member.
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A point of interest was the occasional detection of bi- and trinucleate progeny. These were observed in most progeny, the proportion being usually less than 10%. In cultural appearance, these differed from the uninucleate progeny by having fluffy aerial hyphae and a slow growth rate (0.010.15 mm h-1 versus the normal 0.630.34 mm h-1). In preliminary pairings, no interactions (e.g., formation of mycelial tufts or a demarcation line) were observed, even when they were paired with the normal uninucleate offspring. Attempts to isolate uninucleate colonies from these, using the protoplasting technique (Phillips 1993
), failed. For these reasons, the bi- and trinucleate colonies were excluded from further tests.
Genetic variation within F2 progeny All of the F1 single-spore isolates included in the fruiting test produced basidia. As in parental fruiting, the vast majority of basidia lacked sterigmata or spores. Varying degrees of somatic incompatibility, expressed as the formation of a demarcation line in non-self pairings, was observed also in the F2 progeny pairings. However, the frequency of somatic incompatibility generally was lower than within the F1 progeny. In three F2 progeny (parents T8A/8, T8A/10, and T8A/13), a demarcation line was formed in 19/28 (data not shown), 15/36 (data not shown), and 11/28 (Table VI) of the non-self pairings, respectively. In these series, a demarcation line between the F1 parent and a progeny member was formed in 3/8, 8/9 and 7/8 cases, respectively. In the F2 progeny of the single-spore isolate 263/5, a demarcation line was formed in 17 out of 45 non-self pairings (data not shown). When field Isolate 263 was paired with randomly selected members of its F1 and F2 progeny, the result was always an incompatible reaction (Table VII). In contrast, F1 Isolate 263/5 produced an incompatible reaction in only four cases out of eight when it was paired with its progeny.
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A vast majority of hymenial cells were uninucleate, but binucleate cells also were observed. The cells from which basidia developed were invariably uninucleate. In basidia, the nuclear number was highly variable and no distinct pattern could be observed (Table IX). No clear meiotic divisions were observed in any case. In basidia where basidiospores had not developed, the nuclear numbers ranged from one to seven. In basidia with basidiospores, the nuclear numbers ranged from two to seven, when counting also the nuclei in the basidiospores. The most common nuclear number in basidia was four in both cases (Fig. 2). In basidiospores attached to sterigmata, the nuclear number ranged from one to three.
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| DISCUSSION |
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Regarding the applicability of the classic heterogenic model of somatic incompatibility here, the key question is the ploidy level of the species. In this study, unexpectedly, no nuclear division figures were observed in HCl-Giemsa-stained vegetative hyphae, despite a relatively large sampling. This is surprising when compared with studies on other basidiomycetes, e.g., Armillaria (Korhonen and Hintikka 1974
) and suggests that the nuclear division takes place rapidly. In accordance, no meiotic divisions were observed in the basidia. However, the most common number of nuclei in basidia was four, so the possibility of meiosis remains, due to limited observations. In any case, there is an essential difference between nuclear divisions that take place in the vegetative hyphae and in the basidium: The former produced somatically compatible cells, the latter mostly incompatible ones. Commonly only one or two sterigmata were formed per basidium in this study. The basidia retained features of homokaryotic fruiting; basidial development was interrupted in most cases, and these cells did not produce sterigmata or basidiospores. The low production of basidiospores also has been noted in other studies on homokaryotic fruiting of R. solani (e.g., Adams and Butler 1982
, Julian et al 1997
). Julian et al (1997)
also recorded the nuclear behavior in the basidia; in some homothallic isolates, meiotic divisions were observed, whereas in others meiosis was interrupted. Regarding the karyotic stage of the now-studied cultures, the data are limited and do not exclude the possibility of diploidy. The basidial characteristics would suggest haploid homokaryotic fruiting, but in this case it is not possible to relate the progeny pairing data to the classic heterogenic model of somatic incompatibility.
The heterogenic model of somatic incompatibility would be applicable to C. bicorne only if the species was diploid. In this case, the species would be pseudohomothallic (syn. secondarily homothallic). Among pseudohomothallic basidiomycetes, Agaricus bisporus (Lange) Imbach var. bisporus is the best known. In this species, two nuclei with compatible mating types typically migrate into each basidiospore; the mycelium originating from a single-basidiospore is thus heterokaryotic and able to produce fruit bodies without mating. Royse and May (1982)
and Summerbell et al (1989)
compared the level of heterozygosity in the parents and offspring of A. bisporus using isoenzymes and RFLP markers, respectively. In the first study, the loss of heterozygosity in the progeny was at maximum 6.6%, depending on the loci studied, and in the second 1.9%, indicating that in general the frequency of crossing-over is relatively low in this species. Since crossing-over is restricted, the level of heterozygosity in the parent is efficiently maintained in the offspring. Construction of pedigreed heterokaryons is complicated in secondarily homothallic species, and the mechanism controlling somatic incompatibility has not been studied in A. bisporus. However, roughly 1020% of sibling pairings in this species, based on incidental occasions, might show behavior consistent with some form of somatic incompatibility (Richard W. Kerrigan, pers comm). This would fit well with a somatic incompatibility system controlled by 35 loci if applying the crossing-over frequencies mentioned above.
If C. bicorne represents a pseudohomothallic species, it would not be haploid, and meiotic divisions followed by nuclear fusion in the basidia would be expected to occur. The results indicate that the degree of somatic incompatibility is higher in F1 than in F2 progeny. The heterogenic model of somatic incompatibility could explain the high degree of variation observed in F1 and the reduction in F2 in case the parent isolates were heterozygous at several loci controlling somatic incompatibility, and the frequency of crossing-over were sufficiently high to allow efficient fixation of alleles. In F1 progeny pairings, the highest frequency of somatic incompatibility was now 92%. The complexities of differing unknown recombination rates (crossing-over) for an unknown number of loci argue against presenting a model here. However, if the parental isolate was heterozygous at 10 loci controlling somatic incompatibility, each having a crossing-over frequency of 20%, somatic incompatibility would reach a similar level (89%) in the progeny. If this was indeed the case, C. bicorne would differ considerably from A. bisporus var. bisporus in recombination rate and, regarding the number of loci involved, it would show more similarity to ascomycetes. In this kind of a system, a puzzling question also would be how a high potential for incompatibility could be maintained in wild isolates in the absence of mating.
Flentje and Stretton (1964)
examined anastomosis in the progeny of one homothallic R. solani isolate; perfect fusion was observed in all pairing combinations. Unfortunately Julian et al (1997)
did not include anastomosis testing in their study on homokaryotic fruiting in R. solani. In homothallic populations of the basidiomycete Stereum sanguinolentum (Albertini & Schwein. : Fr.) Fr., normal meiosis takes place in the basidia but all the siblings within an offspring are somatically compatible, whereas non-sibling interactions typically result in an incompatibility reaction (Ainsworth 1987
). There are several other examples of homothallic basidiomycetes that produce genetically identical progeny. If C. bicorne is haploid, it is not a typical homothallic species.
The cassette system first found in yeasts could offer one alternative explanation for the now reported variation. In Saccharomyces cerevisiae Hansen, each haploid genome contains both the a and
mating type gene, and normally one of them is transcribed with its interaction with the MAT locus while the other is silent (e.g., Perkins 1987
). Occasionally, a new copy of the silent-mating type gene is made, the other one is removed from the MAT locus and the new type is transcribed. Mating type switching also has been shown in another ascomycetous genus, Ceratocystis (Witthuhn et al 2000
). In addition, Labarère and Noël (1992)
reported mating type switching in the tetrapolar basidiomycete Agrocybe aegerita (Brig.) Singer. This study showed that some haploid homokaryotic strains spontaneously can switch their mating specificities at the two unlinked A and B mating type factors. This event caused the dikaryotization of homokaryotic mycelia without plasmogamy and led to "pseudo-homokaryotic fruiting", in which parental and switched mating types segregated meiotically as Mendelian markers. As far as we know, there are no reports on a cassette system controlling somatic incompatibility in any filamentous fungus. If a cassette system was involved in Ceratobasidium bicorne, several factors affecting somatic incompatibility should be expected to have a cassette system and the switching would occur, as in A. aegerita, in relation to fruiting. If this is the case, it should be possible to recover parental factors in the F2 progeny as shown by Labarère and Noël (1992)
. Further pairings (parent x F2 and F1parent x F3) will be needed to test this hypothesis.
Recently it was shown that prions might be involved in controlling individualism in fungi. One of the loci controlling vegetative incompatibility in the ascomycete Podospora anserina produces a protein that behaves as a prion analog (Coustou et al 1997
). This protein can catalyze its own alteration to an abnormal form (prion form) and this post-translational alteration changes the vegetative incompatibility group of the strain in question. Of interest in this study, two single-cell isolates from parental Strain T8A showed somatic parental incompatibility. There were also cases in which both perfect fusion and killing reaction were observed in the same replicate. The latter observation was noted also, e.g., by Flentje and Stretton (1964)
and by Julian et al (1996)
, when studying anastomosis behavior of R. solani. These observations show that there is plasticity in the occurrence of incompatibility reaction; it could result from events analogous to the post-translational alteration case described above.
In addition to nuclear genes, mitochondria have been implicated in somatic compatibility: In Coprinus cinereus (Schaeff. : Fr.) S.F. Gray sensu Konr. different mitochondria in the same nuclear background led to strong incompatibility reaction in one of eight cases tested (May 1988
). McCabe et al (1999a)
performed single hyphal isolations from AG 4 strains of R. solani and a low percentage of these were somatically incompatible with the parent. The mechanism behind this was not revealed, but the authors speculated that the parents might have contained more than two nuclear types, or they might be a mosaic in regard to mitochondria. Regarding this study, this hypothesis seems the least likely because the mitochondrial DNA type should be expected to be uniform within each of the family lineages.
The presence of a strongly promoted somatic incompatibility system within C. bicorne also raises a question of its ecological implications. Hyphal fusion with compatible strains provides larger nutrient resources and faster reproduction; in fact, this is regarded as a great benefit of homothallism. The size structure of some fungal populations suggests that survival is low at small ramets (Holmer and Stenlid 1991
, Worrall 1994
). In this respect, high levels of somatic incompatibility within the progeny of this species cannot be regarded as beneficial. On the other hand, fungal viruses are transmitted through cytoplasmic bridges and somatic incompatibility systems create a significant barrier to this movement (e.g., McCabe et al 1999b
). dsRNA viruses have been reported in R. solani, both in association with reduced virulence and with increased virulence (reviewed by Rubio et al 1996
). The occurrence of viruses has not been studied in the C. bicorne.
In conclusion, the uninucleate condition and the basidial characteristics would imply that C. bicorne is homothallic. The element that does not fit this picture is the high frequency of somatic incompatibility among progeny. We currently are not able to provide a satisfactory explanation for this phenomenon, but as discussed above, several mechanisms could account for at least some of the features now reported. In further work, molecular tools should be employed to characterize nuclear DNA and cytoplasmic elements and events separately. The genetic basis of somatic incompatibility is still known only for a handful of basidiomycetes and generalizations should be avoided. Due to the uninucleate nature of this species, it should be a convenient candidate to study the factors controlling somatic incompatibility in Fungi.
| ACKNOWLEDGMENTS |
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| FOOTNOTES |
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Accepted for publication April 11, 2002.
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