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Department of Plant Pathology, Iowa State University, Ames, Iowa, 50011
| ABSTRACT |
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Parsimony analysis of sequences of the internal transcribed spacer region of the nuclear rDNA and partial sequences of the large subunit (LSU) place four anamorphic Chalara species as a monophyletic grouping within the teleomorph genus Ceratocystis. Chalara ovoidea, Ch. thielavioides, Ch. populi, and Ch. elegans (synanamorph: Thielaviopsis basicola) form aleurioconidia typical of the anamorph genus Thielaviopsis, to which the species are transferred. Three of these species (T. ovoidea, T. thielavioides, and T. populi) are morphologically similar to each other but are shown to be distinct by rDNA sequences. The anamorphic genera Chalaropsis and Hughesiella are considered synonyms of Thielaviopsis. Thielaviopsis punctulata, which forms aleurioconidia singly, is shown to be the anamorph of Ce. radicicola. The respective anamorphs for Ce. coerulescens, Ce. fagacearum, and Ce. eucalypti, which lack aleurioconidia, are also transferred to the amended genus Thielaviopsis as T. ungeri, T. quercina, and T. eucalypti. Although Ch. australis and Ch. neocaledoniae do not form aleurioconidia, they are placed in Thielaviopsis based on their endoconidial state and clear affinities to Ceratocystis eucalypti. Three apparently asexual Ambrosiella species belong in the Ce. moniliformis clade based on LSU rDNA sequences, but the cultures available are not suitable for detailed morphological study, and these species are not transferred to Thielaviopsis.
Key words: Ascomycetes, Ceratocystis paradoxa, rDNA, Thielaviopsis paradoxa
| INTRODUCTION |
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The genus Thielaviopsis is based on Thielaviopsis ethacetia Went (Nag Raj and Kendrick 1975
, Went 1893
), which was later recognized as a synonym of Thielaviopsis paradoxa (de Seynes) Höhn, the anamorph of Ceratocystis paradoxa (Dade) Moreau. Went (1893)
gave the generic diagnosis for Thielaviopsis as "Hyphae steriles repentes, subhyalinae, fertiles simplices, septatae. Conidia dimorpha, majora catenulata, ovata, fusca; minora cylindracea, hyalina, ex interiore hypharum catenulatim generata et ex apice exsilientia." Thus, his concept of the genus included conidia of two types, endoconidia from phialides and larger, pigmented aleurioconidia in chains at the tips of specialized hyphae. Peyronel (1916)
erected the genus Chalaropsis, using the type species Chalaropsis thielavioides, for species with aleurioconidia produced singly. Thielaviopsis basicola (Berk. et Br.) Ferr (synanamorph = Chalara elegans) produces aleurioconidia from a basal sporogenous cell, and this conidium undergoes division into an aleurioconidial chain that fragments into individual barrel-shaped spores (Riggs and Mims 2000
).
We used parsimony analysis of sequences from the large subunit and internal transcribed spacer regions (ITS) of the nuclear ribosomal DNA operon to examine the phylogenetic placement of anamorphic species with Ceratocystis affinities. We tested the hypothesis that four of these Chalara species form an asexual lineage within Ceratocystis. We also used morphological comparisons to determine if three of these are distinct species or if they are a single species. The genus Thielaviopsis is amended, and Chalara species with Ceratocystis affinities are transferred to Thielaviopsis.
| MATERIALS AND METHODS |
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PCR, DNA sequencing, and RFLP analysis
A portion of the LSU and the internal transcribed spacer regions (ITS) of the nuclear rDNA were amplified and sequenced for Chalara, Ambrosiella, and Ceratocystis species. The primers (ITS1-F, ITS-4, LR3, LR5, and LROR) and protocols for amplification and sequencing were as described by Paulin and Harrington (2000)
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Partial sequences of the LSU gene were obtained from 10 species within the genus Ceratocystis and six species within Chalara (Table I
). The outgroup taxa Glomerella phacidiomorpha (Cesati) Petrak and Petriella sordida Barron et Gilman are closely related to Ceratocystis (Paulin and Harrington 2000
). The sequences were manually aligned, but 40 of the 590 LSU characters, including gaps, were ambiguously aligned and eliminated before parsimony analysis. After excluding the ambiguously aligned characters, the largest insertion/deletion (indel) within the LSU data set was one base pair.
Sequences of the ITS and the 5.8S rDNA from four species of Ceratocystis were compared to those of five species of Chalara (Ch. ovoidea, Ch. elegans, Ch. thielavioides, Ch. populi, and Ch. punctulata Hennebert). Among the Ceratocystis species, only the ITS sequences of Ce. moniliformis, Ce. adiposa, Ce. radicicola and Ce. paradoxa could be reasonably aligned with those of the five Chalara species. Ceratocystis moniliformis was used as the outgroup taxon because it is distinct molecularly (LSU sequences and MAT-2 sequences, data not shown) and morphologically (hat-shaped ascospores and no aleurioconidia) from the Chalara species. The sequences were manually aligned, but 69 of the 483 ITS characters, including gaps, were ambiguously aligned and, therefore, eliminated before parsimony analysis. After excluding ambiguously aligned characters, the largest indel within the ITS data set was two base pairs.
In both data sets, gaps were treated as a fifth character. Only parsimony informative sites were used in the phylogenetic analyses (PAUP 4.04b, Swofford 1998
). Maximum parsimony heuristic searches were performed with all characters having equal weight, starting trees were obtained via stepwise addition, and tree-bisection-reconnection was used. Robustness of the internal branches of the tree was evaluated by 1000 bootstrap replications using heuristic searches (Felsenstein 1985
). Decay indices (Bremer 1988
) were calculated using AutoDecay version 4.0 (Eriksson 1998
). Trees were rooted at the internal node with basal polytomy.
| RESULTS |
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Kiffer and Delon (1983)
reported that Ch. populi, when compared to Ch. ovoidea, has longer phialides on branched conidiophores. They reported aleurioconidia to be 6.712 x 69 µm and endoconidia to be 618 x 2.23.8 µm, similar to those of Ch. ovoidea. We also found that aleurioconidia of Ch. populi are similar in width to those of Ch. ovoidea (Figs. 2, 3 ).
| TAXONOMY |
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Thielaviopsis Went, Arch. voor de Java Suekerr., p 4. 1893, emend. Paulin, Harrington, et McNew
Thick, dark-walled aleurioconidia present or absent, produced either singly or in chains upon specialized hyphae. Chalara-like conidia are produced by ring wall building within phialides, extruded in chains, cylindrical, remaining hyaline or becoming thick-walled and dark. When known, teleomorphs are placed in Ceratocystis.
Type: Thielaviopsis paradoxa (de Seynes) Höhn., Hedwigia 43: 295. 1904.
Sporoschisma paradoxum de Seynes, Recherches pour Servir à d'Histoire Naturelle des Végétaux Inférieurs, 3: 30. 1886.
Chalara paradoxa (de Seyenes) Sacc, Sylloge Fung., 10: 595. 1892.
Ceratostomella paradoxa Dade, Trans. Br. Mycol. Soc., 13: 191. 1928.
Ophiostoma paradoxum (Dade) Nannf., Svenska Skogsfor. Tidskr. 32: 408. 1934.
Endoconidiophora paradoxa (Dade) Davidson, J. Agric. Res. 50: 802. 1935. Thielaviopsis australis (Kile) Paulin, Harrington, et McNew, comb. nov.
Chalara australis Kile, Austr. J. Bot. 35: 7. 1987. Thielaviopsis basicola (Berk. et Br.) Ferr., Flora Italica Cryptogama. Pars. I: Fungi, Hyphales, Tuberculariaceae-Stilbaceae. Fasc. 6: 113. 1910.
Torula basicola Berk. et Br., Ann. Mag. Nat. Hist., ser. 2, 13: 456. 1854.
Thielaviopsis eucalypti (Z.Q. Yuan et Kile) Paulin, Harrington, et McNew, comb. nov.
Chalara eucalypti Z.Q. Yuan et Kile, Mycol. Res. 100: 573. 1996.
Thielaviopsis euricoi (Bat. et Vital) Paulin, Harrington, et McNew, comb. nov.
Hughesiella euricoi Bat. et Vital, Anais. Soc. Biol. Pernamb., 14: 42. 1956. Thielaviopsis neocaledoniae (Dadant ex Kiffer et Delon) Paulin, Harrington, et McNew. comb. nov.
Chalara neocaledoniae Dadant ex Kiffer et Delon, Mycotaxon 18: 166. 1983.
Thielaviopsis neocaledoniae Dadant, nom. inval., Art. 36, 37. Rev. Gén. Bot. 57: 176. 1950. Thielaviopsis ovoidea (Nag Raj et Kend.) Paulin, Harrington, et McNew, comb. nov.
Chalara ovoidea Nag Raj et Kend., A Monograph of Chalara and Allied Genera. p. 127. 1975. Thielaviopsis populi (Veldeman ex Kiffer et Delon) Paulin, Harrington, et McNew, comb. nov.
Chalara populi Veldeman ex Kiffer et Delon, Mycotaxon 18: 171. 1983.
Chalaropsis populi Veldeman, nom. inval. Art. 36, 37. Meded. Fak. Land. Wet. Gent 36: 1001. 1971. Thielaviopsis punctulata (Hennebert) Paulin, Harrington, et McNew, comb. nov.
Chalaropsis punctulata Hennebert, Anton. Leeuw. 33: 334. 1967.
Ceratostomella radicicola Bliss, Mycologia 33: 468. 1941. Thielaviopsis quercina (Henry) Paulin, Harrington, et McNew, comb. nov.
Chalara quercina Henry, Phytopathology 34: 631. 1944.
Endoconidiophora fagacearum Bretz, Phytopathology 42: 437. 1952. Thielaviopsis thielavioides (Peyr.) Paulin, Harrington, et McNew, comb. nov.
Chalaropsis thielavioides Peyr., Staz. Sper. Agr. It. 49: 596. 1916
Chalara thielavioides (Peyr.) Nag Raj et Kend., A Monograph of Chalara and Allied Genera. p. 136. 1975.
Thielaviopsis ungeri (Sacc.) Paulin, Harrington, et McNew, comb. nov.
Chalara ungeri Sacc., Sylloge Fung., 4: 336. 1886.
Endoconidiophora coerulescens Münch, Naturw. Z. Land. Forstw. 5: 54. 1907.
Ophiostoma coerulescens (Münch) Nannf., Svensa Skogsfor. Tidskr. 32: 408. 1934. | DISCUSSION |
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Four asexual species are the only known plant pathogenic Chalara species that produce aleurioconidia, either singly (T. thielavioides, T. populi, T. ovoidea) or in chains (T. basicola), and they group as an asexual, monophyletic lineage within Ceratocystis based on rDNA sequences. Analysis of DNA sequences from a portion of the MAT-2 gene also groups these Thielaviopsis species as a monophyletic lineage (unpubl). These four Thielaviopsis species appear to be reproductively isolated, soilborne, root pathogens that are no longer dependent upon insects for dispersal, and it is possible that the four species are derived from a common asexual ancestor. The ITS sequences of T. thielavioides, T. ovoidea and T. populi isolates did not clearly delineate these species, but minor morphological differences suggest they are distinct species. Thielaviopsis ovoidea and T. populi may be recently derived species in the T. thielavioides complex.
Two other asexual species, T. australis and T. neocaledoniae, have no known teleomorph. However, only one isolate of T. neocaledoniae is available, and all available isolates of T. australis are of a single mating type (Harrington et al 1998
). Both T. australis and T. neocaledoniae will form sterile perithecia and aborted ascospores when paired with strains of the opposite mating type of Ce. eucalypti or Ce. virescens, respectively (Harrington et al 1998
). Thus, teleomorphs of T. australis and T. neocaledoniae may yet be found.
Three asexual Ambrosiella species (A. ferruginea, A. hartigii, and A. xylebori) form conidia at the tips of hyphal branches that are fed upon by ambrosia beetle symbionts (Batra 1967
). Using partial sequences of the small subunit rDNA, Cassar and Blackwell (1996)
placed these three Ambrosiella species within Ceratocystis, while six other Ambrosiella species were placed in the Ophiostomatales, indicating that the genus Ambrosiella is polyphyletic. Using partial sequences of the large subunit rDNA, we show that the three Ambrosiella species, A. ferruginea, A. hartigii, and A. xylebori, are placed within the Ce. moniliformis group, with A. ferruginea near Ce. fagacearum, and A. xylebori (the type species for Ambrosiella) and A. hartigii closely related to Ce. adiposa. A close examination of the conidia of these three Ambrosiella species may indicate a similarity to the endoconidia of their Ceratocystis relatives.
Chalaropsis punctulata, found on the roots of Lawsonia inermis by Hennebert (1967)
, was determined by Nag Raj and Kendrick (1975)
to be morphologically similar to the anamorph of Ce. radicicola. Comparison of ITS sequences showed no difference between Chalaropsis punctulata and Ce. radicicola, and isolate C1631 from the holotype of Ch. punctulata successfully mated with an isolate of Ce. radicicola in our tests (unpubl). Ceratocystis paradoxa, a close relative to Ce. radicicola, produces aleurioconidia in chains, so the distinction between aleurioconidia produced in chains (T. paradoxa) and aleurioconidia produced singly (Chalaropsis punctulata) appears trivial at the genus level, and we have synonymized Chalaropsis with Thielaviopsis.
There was some minor variation in LSU and ITS sequences among isolates of T. basicola and T. thielavioides. Punja and Sun (1999)
saw substantial variation in RAPD markers among isolates of T. basicola, and they speculated that genetically distinct strains of T. basicola may be adapted to specific hosts. Hammond (1935)
reported on a strain of T. thielavioides that appeared to have adapted to peach (Prunus persica). The morphological and genetic variation found in T. thielavioides suggest that T. thielavioides may also be comprised of host specialized forms, perhaps in the process of speciation.
Other described Thielaviopsis species warrant further study. Thielaviopsis wallemiaeformis Dom. et Ihn. (Dominik and Ihnatowicz 1975
) was considered an invalid name by Kiffer and Delon (1983)
. Thielaviopsis abuensis Chouhan et Panwar (Chouhan and Panwar 1980
) appears morphologically similar to T. basicola. Sugiyama (1968)
described Chalaropsis thielavioides var. ramosissima from buried plant material and distinguished it from T. thielavioides var. thielavioides based on more elongated and larger aleurioconidia. Our examination of the isolate from the holotype of var. ramosissima (C1630) did not reveal a distinction in morphology between var. ramosissima and var. thielavioides, and we have synonymized these varieties.
Our attempts to produce perithecia through pairings of different isolates of T. basicola and T. thielavioides have consistently failed, though other Ceratocystis species readily form perithecia and ascospores on agar media. From the data presented here, it appears that loss of the sexual state has occurred at least once in the evolution of Ceratocystis, and speciation appears to have occurred in this asexual lineage. Although delineation of species can be difficult for asexual fungi (Harrington and Rizzo 1999
), minor morphological characters separate T. ovoidea and T. populi from T. thielavioides, and further speciation may be taking place in T. thielavioides and T. basicola.
| ACKNOWLEDGMENTS |
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| FOOTNOTES |
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Accepted for publication May 27, 2001.
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